Timeline

SUMMER SCHOOL

An annual training and networking event for microbiome researchers from Nordic countries with topics on metagenomic assembly, data integration, antibiotic resistance mapping, and industry insights, along with participant talks, posters, and networking.

The event is designed for intermediate/advanced researchers with basic microbiome data analysis skills and facilitated by FindingPheno project partner, UTU.

SYMPOSIUM

International Symposium on Microbial Ecology (ISME) was held in Cape Town, South Africa and attended by several project partners, many of whom gave talks and/or presented posters including:
- Morten Limborg, University of Copenhagen, speaking in the 'Animal Microbes' session
- Rob Finn, EMBL-EBI, speaking in the 'New Microbial Physiologies and Metabolic Capacities' session
- Leo Lahti, University of Turku, who along with his early career researchers gave 1 talk, facilitated 3 presentations and 4 posters.

DELIVERABLE 4.4 Open source implementation of the dynamic multi-omics models

DELIVERABLE: D3.4 List of Genotype-Phenotype Associations in Chicken, Salmon and Maize

There are many different ways to generate genotype-phenotype relationships. Among the simplest is to treat each genotype-phenotype pair as a pair of isolated vectors and calculate their statistical relationship. Even then, there are options such as which type of statistical association to calculate and how to adapt the technique to different experimental conditions. We used this approach, but we also looked wider and used an approach which considers the dataset more holistically (attribution method) and the research field more broadly (KGE method). 

CONFERENCE

The 23rd European Conference on Computational Biology (ECCB) hosted by the University of Turku and CSC – IT Center for Science was held in Turku, Finland.

Project partner, Leo Lahti and his early career researchers conducted tutorials in:
- 'Orchestrating Microbiome Analysis with Bioconductor', which introduced the latest advances in Bioconductor tools and data structures supporting microbiome analysis.

CONFERENCE - Multi-Omics Data Analysis in Biotechnology: Machine Learning Insights, postdoc, University of Copenhagen

Harnessing the Power of Data Integration for Breakthroughs in Biotechnology presenting FindingPheno project results, the consortium's innovative approaches as well as results in multi-omics data integration and phenotypic prediction.

Poster 

Project partner, UTU presented a poster during the Gene Forum event.

DELIVERABLE: D7.1 

Leo course 

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